HitPredict
PHYSICAL PROTEIN-PROTEIN INTERACTIONS WITH RELIABILITY SCORES

Database Statistics

HitPredict Version 4 contains:
  • 398696 experimentally identified physical protein-protein interactions
  • 70808 proteins
  • 105 species
  • Interaction score derived from annotation-based and method-based information

Interactions


Experiments and Methods
HitPredict contains interactions denoting physical binding events between proteins identified using a variety of methods.

Interaction scores
The number of high confidence interactions in HitPredict from each database and for each species are shown below. Interactions with an annotation score >= 0.5 or a method score >= 0.485, and having an interaction score > 0.28 are considered to be of high confidence.

The ROC curve shows that the HitPredict combined interaction score performs better than the annotation-based score, the method-based score and the Mentha score.



Human Genome Center, The Institute of Medical Science, The University of Tokyo
Last updated: 10 September 2015